BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017G10SP1|AL427209
(347 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1598 607 e-174
>3x_Contig1598
Length = 11902
Score = 607 bits (299), Expect = e-174
Identities = 329/347 (94%)
Strand = Plus / Minus
Query: 1 aggccttcgtaggcctcctacaagttcaagacaattctacattaccattttcttgaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9804 aggccttcgtaggcctcctacaagttcaagacaattctacattaccattttcttgaagag 9745
Query: 61 acacaaaataatggtggttgatgcactgtaatgtcggcaatgcaagattaagaatcacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9744 acacaaaataatggtggttgatgcactgtaatgtcggcaatgcaagattaagaatcacaa 9685
Query: 121 attggaaaatggactaagacaaaatccactgatcggwtgcyaganacaataagttgttga 180
|||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 9684 attggaaaatggactaagacaaaatccactgatcggatgcaagaaacaataagttgttga 9625
Query: 181 ttcgtttaanagcgcagtctttgacgctgacatatatgtgccatttgthacamttctgaa 240
||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 9624 ttcgtttaaaagcgcagtctttgacgctgacatatatgtgccatttgtaacaattctgag 9565
Query: 241 cwggagaaaaggwtgatwttccmgcacagttacammmcacaaccaatttccctcgcgaaa 300
| |||| |||| |||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 9564 ctggagttaaggttgattttcaagcacagttacaaaacacaaccaatttccctcgcgaaa 9505
Query: 301 ttgatttccatgatcatcactacttcttccttactctggaaracctc 347
||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 9504 ttgatttccatgatcatcactacttcttccttactctggaagacctc 9458
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2113
Number of Sequences: 1807
Number of extensions: 2113
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 347
length of database: 10,358,551
effective HSP length: 15
effective length of query: 332
effective length of database: 10,331,446
effective search space: 3430040072
effective search space used: 3430040072
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)